>AY391777.1_prot_AAR01015.1_HCoV-OC43
M--FLILLISLPTAFAVIGD----------LKCTSDTSYINDKDTGPPP-----------
----ISTDTVDVTNGLGTYYVLDRVYLNTTLFLNGYYPTS---GSTYRNMALKGSVLLSR
LW----FKPPFLSDFINGIFAKVKNTKVI---KDRVMYSE---------FPAITIGSTFV
NTS--------------------------------YSVVVQ-PRTINS-----TQDGYNK
LQGLLEVSVC-------QYNMCEYPQTICHPNLGNHRKELWHLDT-----GVV-------
--------SCLY-------------------------------KRNFTYDVNADYLYFH-
-------FYQEGGTFYAYF-------------TDTGVVTKFLFNVYLGMALSHYYVMPLT
CNS---------KVKN--GFTLEYWVTPLTS--RQYLLA----FNQDG------------
------------------------------IIFNAVDCMSDFMSEIKCKTQSIAPPTGVY
ELNGYTVQPIADVYRRKLNLPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFI-
QADSFTCNNIDAAKIYGMC-FSSITIDKFAIPNGRKVDLQLGN---LGYLQSFNYRIDTT
ATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIEDSVFKPRPAGVLTNHDVVYAQHCFKAP
KNFCPC---KLNGSCVGSGPGKNNGIGTCPAGTNYLTCDNL------------CTPDPIT
FKATGTYKCPQTKSLVGIGEHCSGLAVKSDYCG------GNSCTCRPQAFLGWSADSCLQ
GDKCNIFANFILHD--VNSGLTCSTDLQKANTDII--LGVCVNYDLYGILGQGIFVEVNA
TYYNSWQNLLYDSNGNLYGFRDYITNRTFMIRSCYSGRVSAAFH--ANSSEPALLFRNIK
CNYVFNNS--LTRQLQPI----------NYFDSYLGCVVNAYNSTAISVQTCDLTVGS-G
YCVDY--------SKNRRSRGAITTGYRFTNF---EPFTVNSVNDSLEPVGGLYEIQIPS
EFTIGNMEEFIQTSSPKVTIDCAAFVCGDYAACKSQLVEYGSFCDNINAILTEVNELLDT
TQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSECSKASSRSAIEDLLFDKV
KLSDVGFVEA-YNNCT---GGAEIRDLICVQSYKGIKVLPPLLSENQISGYTLAATSASL
FPLWT----AAAGVPFYLNVQYRINGLGVTMDVLSQNQKLIANAFNNALYAIQEGFDATN
--------------SALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALE
AEAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNH
IISLVQNAPYGLYFIHFSYVPTKYVTARVSPGLCIAGD--RGIAPKSGYFV--NVNN---
--TWMYTGSGYYYPEPITENNVVVMSTCAVNYTKAPYVMLNTSIPNL--PDFKEELDQWF
KNQTS-VAPDL--SLDYINVTFLDLQVEMN--------------RLQEAIKVLNQSYINL
KDIGTYEYYVKWPWYVWLLICLAGVAMLVLLFFICCCTGCGT--SCFK---KCGGCCDDY
TGYQELV----IKTSHDD
>NC_006577.2_prot_YP_173238.1_HKU1
M--LLIIFI-LPTTLAVIGD----------FNCTNFA--INDLNTTVPR-----------
----ISEYVVDVSYGLGTYYILDRVYLNTTILFTGYFPKS---GANFRDLSLKGTTYLST
LW----YQKPFLSDFNNGIFSRVKNTKLY---VNKTLYSE---------FSTIVIGSVFI
NNS--------------------------------YTIVVQ-PH----------------
-NGVLEITAC-------QYTMCEYPHTICKSK-GSSRNESWHFDK-----SEP-------
--------LCLF-------------------------------KKNFTYNVSTDWLYFH-
-------FYQERGTFYAYY-------------ADSGMPTTFLFSLYLGTLLSHYYVLPLT
CNA---------ISSNTDNETLQYWVTPLSK--RQYLLK----FDNRG------------
------------------------------VITNAVDCSSSFFSEIQCKTKSLLPNTGVY
DLSGFTVKPVATVHRRIPDLPDCDIDKWLNNFNVPSPLNWERKIFSNCNFNLSTLLRLV-
HTDSFSCNNFDESKIYGSC-FKSIVLDKFAIPNSRRSDLQLGS---SGFLQSSNYKIDTT
SSSCQLYYSLPAINVTINNYNPSSWNRRYGFNNFN---------LSSHSVVYSRYCFSVN
NTFCPCAKPSFASSCKSHKPPS----ASCPIGTNYRSCESTTVLDHTDWCRCSCLPDPIT
--AYDPRSCSQKKSLVGVGEHCAGFGVDEEKCGVLDGSYNVSCLCSTDAFLGWSYDTCVS
NNRCNIFSNFILNG--INSGTTCSNDLLQPNTEVF--TDVCVDYDLYGITGQGIFKEVSA
VYYNSWQNLLYDSNGNIIGFKDFVTNKTYNIFPCYAGRVSAAFH--QNASSLALLYRNLK
CSYVLNNIS-LTTQ--------------PYFDSYLGCVFNADNLTDYSVSSCALRMGS-G
FCVDYNSPSS---SSSRRKRRSISASYRFVTF---EPFNVSFVNDSIESVGGLYEIKIPT
NFTIVGQEEFIQTNSPKVTIDCSLFVCSNYAACHDLLSEYGTFCDNINSILDEVNGLLDT
TQLHVADTLMQGVTLSSNLNTNLHFDVDNINFKSLVGCLGPHCG-SSSRSFFEDLLFDKV
KLSDVGFVEA-YNNCT---GGSEIRDLLCVQSFNGIKVLPPILSESQISGYTTAATVAAM
FPPWS----AAAGIPFSLNVQYRINGLGVTMDVLNKNQKLIATAFNNALLSIQNGFSATN
--------------SALAKIQSVVNSNAQALNSLLQQLFNKFGAISSSLQEILSRLDALE
AQVQIDRLINGRLTALNAYVSQQLSDISLVKFGAALAMEKVNECVKSQSPRINFCGNGNH
ILSLVQNAPYGLLFMHFSYKPISFKTVLVSPGLCISGD--VGIAPKQGYFI--KHND---
--HWMFTGSSYYYPEPISDKNVVFMNTCSVNFTKAPLVYLNHSVPKL--SDFESELSHWF
KNQTS-IAPNLTLNLHTINATFLDLYYEMN--------------LIQESIKSLNNSYINL
KDIGTYEMYVKWPWYVWLLISFSFIIFLVLLFFICCCTGCGS--ACFS---KCHNCCDEY
GGHHDFV----IKTSHDD
>EF065513.1_prot_ABN10911.1_Bat_HKU9-1
M--LLILVL--GVSLAAASR----------PECFNPRFTLTPLNHT--------------
-----LNYTSIKAKVSNVLLPDPYIAYSGQTLRQNLFMAD--MSNTILYPVTPPANGANG
GFI---YNTSII-PVSAGLFVNTWMYRQPA--SSRAYCQE---------PFGVAFGDTFE
NDR--------------------------------IAILIMAPDNLGS-----WSAVAPR
NQTNIYLLVC------SNATLCINPGF-------NRWGPAGSFIAPDALVDHSN------
--------SCFV-------------------------------NNTFSVNISTSRISLA-
-----FLFK--DGDLLIYHSGWLPTSNFEHGFSRGSHPMTYFMSLPVGGNLPRAQFFQSI
VRSNAI---D-KGDGMCTNFDVNLHVAHLIN--RDLLVS----YFNNG------------
------------------------------SVANAADCADSAAEELYCVTGSFDPPTGVY
PLSRYRAQVAGFV-RVTQRGSYCTPPYSVLQDP-PQPVVWRRYMLYDCVFDFTVVVDSL-
PTHQLQCYGVSPRRLASMC-YGSVTLDVMRINETHLNNLFNRV---PDTFSLYNYALPDN
FYGCLHAFYLNSTAPYAVA------NRF---------------PIKPGGRQSNSAFIDT-
---------VIN-------------------AAHYSPFSYV-------------------
------------------------------------------------------------
-YGLAVITLKPAAG----SKLVCPV---ANDTVVI--TDRCVQYNLYGYTGTGVLSKNTS
LVIPDGKVFTASSTGTIIGVS--INSTTYSIMPCVTVPVSVGY---HPNFERALLFNGLS
CSQRSRAV---TEPVSVLWSASATAQ--DAFDTPSGCVVNVELRNTTIVNTCAMPIGN-S
LCFINGSIA----TANADSLPRL----QLVNYDPLYDNSTATPMTPV------YWVKVPT
NFTLSATEEYIQTTAPKITIDCARYLCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDS
ALLSLVKELS--INTRDEVTT-FSFD-GDYNFTGLMGCLGPNCGATTYRSAFSDLLYDKV
RITDPGFMQS-YQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAVA
SSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFTETS
--------------IALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIFSRLEGLA
ANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISECVKAQSLRNDFCGNGTH
VLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGLCHNGT---GYAPRQGMFVLPNNTN---
--MWHFTTMQFYNPVNISASNTQVLTSCSVNYTSVNYTVLEPSVPGD--YDFQKEFDKFY
KNLST-IFNNTF-NPNDFNFSTVDVTAQIK--------------SLHDVVNQLNQSFIDL
KKLNVYEKTIKWPWYVWLAMIAGIVGLVLAVIMLMCMTNCC---SCFKGMCDCRRCCGSY
DSYDDVYPAVRVNKKRTV
>MG772934.1_prot_AVP78042.1_Bat_SARS-like-CoV-ZXC21
M--LFFLFL--QFALVNSQ-------------C-DLTGRTP-------------------
-----LNPNYTNSSQRGVYYPDTIYRSDTLVLSQGYFLPF--YSNVSWYYSL-TTNNAAT
KR----TDNPIL-DFKDGIYFAATEHSNI--------------------VRGWIFGTTLD
NTS--------------------------------QSLLIV------------------N
NATNVIIKVC-------NFDFCYDPYLSGYYH----NNKTWSIREFAVYSFYA-------
--------NCTF----------------------------EYVSKSFMLNISGNGGLFNT
LRE--FVFRNVDGHFKIYS-KFTPV-NLNRGLPTGLSVLQPLVELPVSINITKFRTLLTI
HRG------DPMSNNGWTAFSAAYFVGYLKP--RTFMLK----YNENG------------
------------------------------TITDAVDCALDPLSETKCTLKSLSVQKGIY
QTSNFRVQPTQSIVRFPNITNVCPFHKVFNATRFPSVYAWERTKISDCIADYTVFYNST-
SFSTFKCYGVSPSKLIDLC-FTSVYADTFLIRFSEVRQVAPGQ---TGVIADYNYKLPDD
FTGCVIAWNTAKQDTG---------HYFYRSHRST--------KLKPFERDLSSDE----
------------------------------------------------------------
---------NGVRTLSTYDFNP-------------------------------NVPLEYQ
ATRVVVLSFELLNA----PATVCGP---KLSTQLV--KNQCVNFNFNGLKGTGVLTD-SS
KRFQSFQQFGKDASDFIDSVRDPQTLEILDITPCSFGGVSVITPGTNTSSEVAVLYQDVN
CTDVPTTI--HADQLTPAWRIYAIGT--SVFQTQAGCLIGAEHVNASY--ECDIPIGA-G
ICASYHTAS----ILRSTGQKAI----VAYTMSLGAENSIAYANNS---------IAIPT
NFSISVTTEVMPVSMAKTSVDCTMYICGDSIECSNLLLQYGSFCTQLNRALSGIAIEQDK
NTQEVFAQVKQ-IYKTPPIKD---F--GGFNFSQILP----DPSKPSKRSFIEDLLFNKV
TLADAGFIKQ-YGDCL---GDISARDLICAQKFNGLTVLPPLLTDEMIAAYTAALISGTA
TAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQESLTSTA
--------------SALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVE
AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH
LMSFPQSAPHGVVFLHVTYIPSQEKNFTTAPAICHEGK---AHFPREGVFV--SNGT---
--HWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPEL--DSFKEELDKYF
KNHTS-PDIDLG-DISGINASVVNIQKEID--------------RLNEVARNLNESLIDL
QELGKYEHYIKWPWYVWLGFIAGLIAIVMVTILLCCMTSCC---SCLKGCCSCGFCCK-F
DE-DDSEPVLKGVKLHYT
>NC_045512.2_prot_YP_009724390.1_2019-nCoV
M--FVFLVL---LPLVSSQ-------------CVNLTTRTQ-------------------
-----LPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPF--FSNVTWFHAIHVSGTNGT
KR----FDNPVL-PFNDGVYFASTEKSNI--------------------IRGWIFGTTLD
SKT--------------------------------QSLLIV------------------N
NATNVVIKVC-------EFQFCNDPFLGVYYH---KNNKSWMESEFRVYSSAN-------
--------NCTF----------------------------EYVSQPFLMDLEGKQGNFKN
LRE--FVFKNIDGYFKIYS-KHTPI-NLVRDLPQGFSALEPLVDLPIGINITRFQTLLAL
HRS-YLTPGD--SSSGWTAGAAAYYVGYLQP--RTFLLK----YNENG------------
------------------------------TITDAVDCALDPLSETKCTLKSFTVEKGIY
QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSA-
SFSTFKCYGVSPTKLNDLC-FTNVYADSFVIRGDEVRQIAPGQ---TGKIADYNYKLPDD
FTGCVIAWNSNNLDSKVGG----NYNYLYRLFRKS--------NLKPFERDISTEIYQAG
S----------------------------------TPCNGVEGF----------------
---------NCYFPLQSYGFQP-------------------------------TNGVGYQ
PYRVVVLSFELLHA----PATVCGP---KKSTNLV--KNKCVNFNFNGLTGTGVLTE-SN
KKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVN
CTEVPVAI--HADQLTPTWRVYSTGS--NVFQTRAGCLIGAEHVNNSY--ECDIPIGA-G
ICASYQTQTNSPRRARSVASQSI----IAYTMSLGAENSVAYSNNS---------IAIPT
NFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDK
NTQEVFAQVKQ-IYKTPPIKD---F--GGFNFSQILP----DPSKPSKRSFIEDLLFNKV
TLADAGFIKQ-YGDCL---GDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTI
TSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTA
--------------SALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVE
AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH
LMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGK---AHFPREGVFV--SNGT---
--HWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPEL--DSFKEELDKYF
KNHTS-PDVDLG-DISGINASVVNIQKEID--------------RLNEVAKNLNESLIDL
QELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCC---SCLKGCCSCGSCCK-F
DE-DDSEPVLKGVKLHYT
>NC_004718.3_prot_NP_828851.1_SARS_CoV
M--FIFLLF---LTLTSGSDL---------DRCTTFDDVQA-------------------
-----PNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPF--YSNVTGFHTI-NHT----
------FGNPVI-PFKDGIYFAATEKSNV--------------------VRGWVFGSTMN
NKS--------------------------------QSVIII------------------N
NSTNVVIRAC-------NFELCDNPFFAV-------SKPMGTQTHTMIFDNAF-------
--------NCTF----------------------------EYISDAFSLDVSEKSGNFKH
LRE--FVFKNKDGFLYVYK-GYQPI-DVVRDLPSGFNTLKPIFKLPLGINITNFRAILTA
FSP---------AQDIWGTSAAAYFVGYLKP--TTFMLK----YDENG------------
------------------------------TITDAVDCSQNPLAELKCSVKSFEIDKGIY
QTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNST-
FFSTFKCYGVSATKLNDLC-FSNVYADSFVVKGDDVRQIAPGQ---TGVIADYNYKLPDD
FMGCVLAWNTRNIDATSTG----NYNYKYRYLRHG--------KLRPFERDISNVPFSPD
G----------------------------------KPCTP-PAL----------------
---------NCYWPLNDYGFYT-------------------------------TTGIGYQ
PYRVVVLSFELLNA----PATVCGP---KLSTDLI--KNQCVNFNFNGLTGTGVLTP-SS
KRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVN
CTDVSTAI--HADQLTPAWRIYSTGN--NVFQTQAGCLIGAEHVDTSY--ECDIPIGA-G
ICASYHTVS----LLRSTSQKSI----VAYTMSLGADSSIAYSNNT---------IAIPT
NFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDR
NTREVFAQVKQ-MYKTPTLKY---F--GGFNFSQILP----DPLKPTKRSFIEDLLFNKV
TLADAGFMKQ-YGECL---GDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTA
TAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTS
--------------TALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVE
AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH
LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGK---AYFPREGVFV--FNGT---
--SWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPEL--DSFKEELDKYF
KNHTS-PDVDLG-DISGINASVVNIQKEID--------------RLNEVAKNLNESLIDL
QELGKYEQYIKWPWYVWLGFIAGLIAIVMVTILLCCMTSCC---SCLKGACSCGSCCK-F
DE-DDSEPVLKGVKLHYT
>NC_014470.1_prot_YP_003858584.1_Bat_BM48-31
MKFLAFLCL---LGFANAQD----------GKCGTLSNKSP-------------------
-----SKLTQTPSSRRGFYYFDDIFRSSIRVLTTGHFLPF--NTNLTWYLTL-KSNGKQR
IY----YDNPNI-NFGDGVYFGLTEKSNV--------------------FRGWIFGSTLD
NTT--------------------------------QSAVLF------------------N
NGTHIVIDVC-------NFNFCADPMFAVNSG---QPYKTW------IYTSAA-------
--------NCTY-----------------------------HRAHAFNISTNMNPGKFKH
FRE--HLFKNVDGFLYVYH-NYEPI-DLNSGFPSGFSVLKPILKLPFGLNITYVKAIMTL
FSS---------TQSNFDADASAYFVGHLKP--LTMLVD----FDENG------------
------------------------------TIIDAIDCSQDPLSELKCTTKSFTVEKGIY
QTSNFRVTPTTEVVRFPNITQLCPFNEVFNITSFPSVYAWERMRITNCVADYSVLYNSSA
SFSTFQCYGVSPTKLNDLC-FSSVYADYFVVKGDDVRQIAPAQ---TGVIADYNYKLPDD
FTGCVIAWNTNSLDSSN--------EFFYRRFRHG--------KIKPYGRDLSNVLFNPS
G----------------------------------GTCSA-EGL----------------
---------NCYKPLASYGFTQ-------------------------------SSGIGFQ
PYRVVVLSFELLNA----PATVCGP---KQSTELV--KNKCVNFNFNGLTGTGVLTN-ST
KKFQPFQQFGRDVSDFTDSVRDPKTLEILDIAPCSYGGVSVITPGTNASSSVAVLYQDVN
CTDVPTML--HADQISHDWRVYAFRNDGNIFQTQAGCLIGAAYDNSSY--ECDIPIGA-G
ICAKYTNVSS---TLVRSGGHSI----LAYTMSLGDNQDIVYSNNT---------IAIPM
NFSISVTTEVLPVSMTKTSVDCNMYICGDSTECSNLLLQYGSFCTQLNRALAGIAVEQDR
NTRDVFAQTKA-MYKTPSLKD---F--GGFNFSQILP----DPAKPSSRSFIEDLLYNKV
TLADPGFMKQ-YGDCL---GGVNARDLICAQKFNGLTVLPPLLTDEMIAAYTAALISGTA
TAGFTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQDSLSTTT
--------------TALGKLQDVINQNAIALNTLVKQLSSNFGAISSVLNDILSRLDKVE
AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH
LMSFPQAAPHGVVFLHVTYVPSQEQNFTTAPAICHEGK---AHFPREGVFV--TNGT---
--HWFITQRNFYSPQPITTDNTFVSGNCDVVIGIVNNTVYDPLQPEL--DSFKEELDKYF
KNHTS-QNVSLD-GLNNINASVVDIKKEIE--------------HLNEIAKSLNESLIDL
QELGKYEQYIKWPWYVWLGFIAGLIAIVMATIMLCCMTSCC---SCLKGVCSCASCCK-F
DE-DHSEPVLTGVKLHYT
>NC_019843.3_prot_YP_009047204.1_MERS-CoV
M--IHSVFL-LMFLLTPTESYVDVGPDSVKSACIEVDIQQTFFDKT--------------
-----WPRPIDVSKADGIIYPQGRTYSNITITYQGLFPYQGDHGDMYVYSAGHATGTTPQ
KLFVANYSQDVK-QFANGFVVRIGAAANS---TGTVIISPSTSATIRKIYPAFMLGSSVG
NFSDG----------------KMGRF-------FNHTLVLL-PDGCGTLLRAFYCILEPR
SGNH-----CPAGNSYTSFATYHTPATDCSDGNYNRNASLNSFKE---YFNLR-------
--------NCTF---------------------------------MYTYNITEDEILEW-
-----FGITQTAQGVHLFSSRYVDL---------YGGNMFQFATLPVYDTIKYYSIIPHS
IRS---------IQSD-RKAWAAFYVYKLQP--LTFLLD----FSVDG------------
------------------------------YIRRAIDCGFNDLSQLHCSYESFDVESGVY
SVSSFEAKPSGSVVEQAEGV-ECDFSPLLSGTP-PQVYNFKRLVFTNCNYNLTKLLSLF-
SVNDFTCSQISPAAIASNC-YSSLILDYFSYPLSMKSDLSVSS---AGPISQFNYKQSFS
NPTCLILATVPHNLTTITK------------------------PLKYSYINKCSRLLSDD
RTEVPQ---LVN-------------------ANQYSPCVSI---------------VPST
VWEDGDYYRKQLSPLEGGGWLV-------------------------------ASGSTVA
MTEQLQMGFGITVQYGTDTNSVCPKLEFANDTKIASQLGNCVEYSLYGVSGRGVFQNCTA
VGVRQ-QRFVYDAYQNLVGYYS-DDGNYYCLRACVSVPVSVIYD--KETKTHATLFGSVA
CEHISSTMSQYSRSTRSMLKRRDSTY--GPLQTPVGCVLGLVNSS-LFVEDCKLPLGQ-S
LCALPDTPS----TLTPRSVRSVPGEMRLASIAFNHPIQVDQLNSSY------FKLSIPT
NFSFGVTQEYIQTTIQKVTVDCKQYVCNGFQKCEQLLREYGQFCSKINQALHGANLRQDD
SVRNLFASVKS-SQSSPIIPG---FG-GDFNLTLLEP-VSISTGSRSARSAIEDLLFDKV
TIADPGYMQG-YDDCM-QQGPASARDLICAQYVAGYKVLPPLMDVNMEAAYTSSLLGSIA
GVGWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTTN
--------------EAFQKVQDAVNNNAQALSKLASELSNTFGAISASIGDIIQRLDVLE
QDAQIDRLINGRLTTLNAFVAQQLVRSESAALSAQLAKDKVNECVKAQSKRSGFCGQGTH
IVSFVVNAPNGLYFMHVGYYPSNHIEVVSAYGLCDAANPTNCIAPVNGYFI--KTNNTRI
VDEWSYTGSSFYAPEPITSLNTKYVAP-QVTYQNISTNLPPPLLGNSTGIDFQDELDEFF
KNVST-SIPNFG-SLTQINTTLLDLTYEML--------------SLQQVVKALNESYIDL
KELGNYTYYNKWPWYIWLGFIAGLVALALCVFFILCCTGCGT--NCM-GKLKCNRCCDRY
EE-YDLEP----HKVHVH
>KF514433.1_prot_AGT21367.1_HCoV229E
M-----------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------FVLLVAYALLH-----IAGCQTT
NGMNTSHSVC------NGCVGHSENVFAVESG--GYIPSDFAFNNWFLLTNTSSVVDGVV
RSFQPLLLNCLWSVSGSRFTTGFVYFNGTGRG-DCKGFYSNASSDVIRYNINFE----EN
LRRGTILFKTSYGAVVFYC--------------TNNTLVSGDAHIPSGTVLGNFYCF---
------------VNTTIGNETTSAFVGALPKTVREFVISRTGHFYINGYRYFSLGNVEAV
NFNVTNAETT-VCTVALASYADVLVNVSQTAIANIIYC-NSVINRLRCDQLSFDVPDGFY
STSPIQS---------------VELPVSIVSLP-----VYHKHTFIVLYVNFKLRSGV--
----GRCYNCRPAVVNITLANFNETKGPLCVDTSHFTTQFVGAKF-------DRWSASIN
TGNCPFSFG----------------------------------KVNNFVK-FGSVCFSLK
D--IPG------------------------------------------------------
---------GCAMPIMANLANL-------------------------------NSHNIGS
LYVSWSDGDVITGV----PKPVEGV---SSFMNVT--LNKCTKYNIYDVSGVGVIRI-SN
DTFLNGITYTSTS-GNLLGFKDVTNGTIYSITPCNPPDQLVVY---QQAVVGAMLSENFT
SYGFS-----------------------NVVEMPKFFYASNGTYNCT---DAVLTYSSFG
VCADGSIIAVQPRNVSYDSVSAI----------------------------VTANLSIPS
NWTTSVQVEYLQITSTPIVVDCSTYVCNGNVRCVELLKQYTSACKTIEDALRNSAMLESA
DVSEMLTFDKK-AFTLANVSS---F--GDYNLSSVIPSLPRSGSRVAGRSAIEDILFSKL
VTSGLGTVDADYKKCT---KGLSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGIA
LGGLT----SAASIPFSLAIQSRLNYVALQTDVLQENQKILAASFNKAMTNIVDAFTGVN
DAITQTSQALQTVATALNKIQDVVNQQGNSLNHLTSQLRQNFQAISSSIQAIYDRLDIIQ
ADQQVDRLITGRLAALNVFVSHTLTKYTEVRASRQLAQQKVNECVKSQSKRYGFCGNGTH
IFSLVNAAPEGLVFLHTVLLPTQYKDVEAWSGLCVDGR--NGYVLRQPNLALYKEGN---
--YYRITSRIMFEPRIPTIADFVQIENCNVTFVNISRSELQTIVPEY--IDVNKTLQELS
YKLPNYTVPDL--VVEQYNQTILNLTSEISTLENKSAELNYTVQKLQTLIDNINSTLVDL
KWLNRVETYIKWPWWVWLCISVVLIFVVSMLLLCCCSTGCCGFFSCFAS--SIRGCCE--
---STKLPYYDVEKIHIQ
>KF530114.1_prot_AGT51394.1_HCoV-NL63
M--KLFLIL-LVLPLASCF-----------STCNSNAN-ISMLQLGVPDNSSTIVTGLLP
THWICANQSTSVYSAKGFFYIDVGNHRSAFALHTGYYDANQYYIYVTNEIGLNASVTLK-
-----------ICKFRNTTFDFLSNASSSFDCIVNLLFTE---------QLGAPLGITIS
GETVRLHLYNVTRTFYVPAAYKLTKLSVKCYFNYSCVFSVVNATVTVN-----VT---TH
NGRVVNYTVC------DDCNGYTDNIFSVQQD--GRIPNGFPFNNWFLLTNGSTLVDGVS
RLYQPLRLTCLWPVPGLKSSTGFVYFNATGSDVNCNGYQHNSVADVMRYNLNFSANSVDN
LKSGVIVFKTLQYDVLFYC--------------SNSSSGVLDTTIPFGPSSQPYYCF---
------------INSTINTTHVSTFVGILPPTVREIVVARTGQFYINGFKYFDLGFIEAV
NFNVTTASATDFWTVAFATFVDVLVNVSATNIQNLLYC-DSPFEKLQCEHLQFGLQDGFY
SANFLDD---------------NVLPETYVALP-----IYYQHTDI----NFTATASFG-
----GSCYVCKPRQVNISL-NGNTS---VCVRTSHFSIRYIYNRVKSGSPGDSSWHIYLK
SGTCPFSFS----------------------------------KLNNFQK-FKTICFSTV
E--VPG------------------------------------------------------
---------SCNFPLEATWHYT-------------------------------SYTIVGA
LYVTWSEGNSITGV----PYPVSGI---REFSNLV--LNNCTKYNIYDYVGTGIIRS-SN
QSLAGGITYVSNS-GNLLGFKNVSTGNIFIVTPCNQPDQVAVY---QQSIIGAMTAVNES
RYGLQ-----------------------NLLQLPNFYYVSNGGNNCT---TAVMTYSNFG
ICADGSLIPVRPRNSSDNGISAI----------------------------ITANLSIPS
NWTTSVQVEYLQITSTPIVVDCATYVCNGNPRCKNLLKQYTSACKTIEDALRLSAHLETN
DVSSMLTFDSN-AFSLANVTS---F--GDYNLSSVLPQRNIHSSRIAGRSALEDLLFSKV
VTSGLGTVDVDYKSCT---KGLSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGMV
LGGLT----SAAAIPFSLALQARLNYVALQTDVLQENQKILAASFNKAINNIVASFSSVN
DAITQTAEAIHTVTIALNKIQDVVNQQGSALNHLTSQLRHNFQAISNSIQAIYDRLDSIQ
ADQQVDRLITGRLAALNAFVSQVLNKYTEVRGSRRLAQQKINECVKSQSNRYGFCGNGTH
IFSIVNSAPDGLLFLHTVLLPTDYKNVKAWSGICVDGI--YGYVLRQPNLVLYSDNG---
--VFRVTSRVMFQPRLPVLSDFVQIYNCNVTFVNISRVELHTVIPDY--VDVNKTLQEFA
QNLPKYVKPNF--DLTPFNLTYLNLSSELKQLEAKTASLFQTTVELQGLIDQINSTYVDL
KLLNRFENYIKWPWWVWLIISVVFVVLLSLLVFCCLSTGCCGCCNCLTS--SMRGCCDCG
---STKLPYYEFEKVHVQ
